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Hello,
Your student visa application will remain at 50% until you are in Malaysia and submit your passport to your university.
But you have to wait for your TA to be able to travel.
Check your TA status on EMGS website not app. (Choose travel authorization)

https://visa.educationmalaysia.gov.my/emgs/application/searchForm/

what you need is travel authorization to come to Malaysia and submit your passport and please keep in mind that renewal document submission can be done online however visa endorsement cannot be done online and you need to be in Malaysia to complete the renewal and get the new visa stamp.